Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015937440.1_cds_XP_016482730.1_73926
CDS Infomation

[gene=LOC107803503] [db_xref=GeneID:107803503] [protein=BTB/POZ domain-containing protein NPY2-like] [protein_id=XP_016482730.1] [location=complement(join(14579..15133,15857..17014,17595..17664,18762..18823))] [gbkey=CDS]
Sequence

ATGAAGTTCATGAAACTTGGATCCAAACCTGATACCTTTCAATCAGATGGGAAAAATATC
AGATATGTTGCTTCAGAGTTGGCTTCTGACATCGTTGTTAATATAGGAGATGTGAAGTTT
TATCTGCATAAGTTTCCTCTTATGTCCAAGAGTGCTTGTTTGCAAAAGCTGGTAGCGAGC
ACTAGTGAAGGAAATGGTGATGAAGTTTATATCCATGACATTCCTGGAGGGCCTAGTGCC
TTTGAAATATGTGCCAAGTTTTGTTACAGTATGACCGTTACACTGAATGCTTATAATGTC
ATAGCAGCAAGGTGTGCTGCAGAGTATCTTGAAATGCATGAGACTGTTGAGAAAGGAAAC
CTTATTTACAAGGTTGATGTTTTCCTTCACTCGAGCATCTTCCGAAGCTGGAAAGATTCA
ATAATACTTCTTCAGACCACTAAGTCATCTCGGTTACATATGTGTGAGGAAGTGAAGTTG
ATCAGCTACTGTATTGATGCTATAGCATCCAAGACATGTATTGATGTTCGCAAGGTTGAT
TGGTCTTACACCTATAACCGGACAAAGATACCAGAGGAAAATGGAAATTCGAATGGAATT
AGAAGCCGTGTGGTGCCAAATGATTGGTGGGTTGATGACTTAAGTGAGCTTGAAATAGAT
CTTTATAAACGGGTTATTGTCAACATAAAGAATAAAGGGATTGTTTCCCCGGAAGTGATT
GGAGAAGCTATTCAAGCTTATGCTTCGAGAAGGTTGCCAGGCTTTAGCAAGGGTGATGTC
TCCAGATCACGCTCTATATTGGATACAATTGTAAGGTTATTACCTGCTGAAAAAGGTAGC
GTCTCTTGTAGTTTCTTGTTGAGATTGCTAAAAGCATCCGTTTCAGTGGATTCTGGAGAA
ATGGTAAAGGCAGAACTAGTAAAAAGAATAGGGCAGCAACTGGAGGAGGCTTCTGTCGAT
GATCTTTTGATTCGAGCTATAGATGGGGAAGCGACAATGTATGATGTCCATGTCGTCCAC
AAAATACTAGAAGGTTTTGTGTTGCGTGATGAAGATTCTAAAACTGAGTTGGAAGATGGT
AATGATGAAATTCCAGAGGTCAGAAAGCCAGGGCTTGACTCAGAAGCTTCAAAGCTCATG
GTGGCGAAGCTAGTAGATGGATACCTTACAGAAATTGCCAAGGATCCTAATCTCCCTTTG
TCAACATTTGTTGGTCTGGCAGAGATGGTCACAAATTTCCCTCGCCCTCGTCATGACAGC
CTTTATCGCGCAATTGATATGTACCTCAAGGAGCACCCTGGGATCAGCAAGAGTGACAGA
AAGAGAATTTGCGGGCTGATGGACTGCAAGAAGCTCTCTGTTAATGCATGTACACATGCC
GTGCAAAATGAGAGACTTCCGTCACGTGTTGTCGTACAAGTTCTCTTTTTTGAGCAAGTC
AGGGCCAATGCATCATCGGGTTGCAGCACCCCGGATCTGCCCAAAGCTATTAGGGACCTT
ACTGCTGGTGTTTCATATGAGAGCTCAAGATCAGCGACAACAAATACAGAAGACTCGGAG
GTTACAGCCTCTGCTGAAGAACTGAGGGCATTGAAAGAAGAGCTGGCAGCCTTAAAGTTG
CAAAATGGAGGACTAATTGACAAAGTTAATGGAGATACCAAACGTGCTGCCACTAGTAGA
ATGAAAGGCTTGCTTTCATCGAAGAGAATCTTTTCCAGAATCTGGTCAAGTAAAGGCGGG
CAAGGGGAAAATAGTGGGTCAGATTCATCGGAGAGTCTTGGTTCTGCCAGCTTAGAAGAA
GCAAAGTACACACCTTCAAGAAAAGGAAGACATTCAGTTTCTTAG

Peptide Sequence

PEP ID

XP_016482730.1
PEP Infomation

PREDICTED: BTB/POZ domain-containing protein NPY2-like [Nicotiana tabacum]
Sequence

MKFMKLGSKPDTFQSDGKNIRYVASELASDIVVNIGDVKFYLHKFPLMSKSACLQKLVAS
TSEGNGDEVYIHDIPGGPSAFEICAKFCYSMTVTLNAYNVIAARCAAEYLEMHETVEKGN
LIYKVDVFLHSSIFRSWKDSIILLQTTKSSRLHMCEEVKLISYCIDAIASKTCIDVRKVD
WSYTYNRTKIPEENGNSNGIRSRVVPNDWWVDDLSELEIDLYKRVIVNIKNKGIVSPEVI
GEAIQAYASRRLPGFSKGDVSRSRSILDTIVRLLPAEKGSVSCSFLLRLLKASVSVDSGE
MVKAELVKRIGQQLEEASVDDLLIRAIDGEATMYDVHVVHKILEGFVLRDEDSKTELEDG
NDEIPEVRKPGLDSEASKLMVAKLVDGYLTEIAKDPNLPLSTFVGLAEMVTNFPRPRHDS
LYRAIDMYLKEHPGISKSDRKRICGLMDCKKLSVNACTHAVQNERLPSRVVVQVLFFEQV
RANASSGCSTPDLPKAIRDLTAGVSYESSRSATTNTEDSEVTASAEELRALKEELAALKL
QNGGLIDKVNGDTKRAATSRMKGLLSSKRIFSRIWSSKGGQGENSGSDSSESLGSASLEE
AKYTPSRKGRHSVS

Transcript Sequence

Gene sequence data has not been registered.